SRTsim is an independent, reproducible, and flexible SRT simulation framework that can be used to facilitate the development of SRT analytical methods for a wide variety of SRT-specific analyses. It utilizes spatial localization information to simulate SRT expression count data in a reproducible and scalable fashion. Two major simulation schemes are implemented in SRTsim: reference-based and reference-free.

Licenses:
The software is built and available as open source under GPL-3.0 License.
The website is built upon minima theme that is available as open source under the terms of the MIT License.

SRTsim_pipeline